Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cux2P70298 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cux2P70298 Gm19001-201ENSMUST00000222736 1651 ntBASIC17.39■□□□□ 0.38
Cux2P70298 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cux2P70298 Gm28624-201ENSMUST00000186430 2131 ntBASIC17.39■□□□□ 0.38
Cux2P70298 Gm5960-201ENSMUST00000188483 406 ntBASIC17.39■□□□□ 0.38
Cux2P70298 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Cux2P70298 4930500F04Rik-203ENSMUST00000202177 576 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cux2P70298 Gm39481-201ENSMUST00000210379 512 ntBASIC17.39■□□□□ 0.38
Cux2P70298 Gm18030-201ENSMUST00000222163 731 ntBASIC17.39■□□□□ 0.38
Cux2P70298 AC154431.1-201ENSMUST00000224910 880 ntBASIC17.39■□□□□ 0.38
Cux2P70298 CT025579.2-201ENSMUST00000225280 816 ntBASIC17.39■□□□□ 0.38
Cux2P70298 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cux2P70298 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cux2P70298 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cux2P70298 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cux2P70298 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC17.39■□□□□ 0.37
Cux2P70298 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Tes-201ENSMUST00000076654 2685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Cux2P70298 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cux2P70298 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cux2P70298 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC17.38■□□□□ 0.37
Cux2P70298 Gm16184-201ENSMUST00000162324 573 ntBASIC17.38■□□□□ 0.37
Cux2P70298 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC17.38■□□□□ 0.37
Cux2P70298 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC17.38■□□□□ 0.37
Cux2P70298 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Cux2P70298 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC17.38■□□□□ 0.37
Cux2P70298 AC157650.1-201ENSMUST00000224582 610 ntBASIC17.38■□□□□ 0.37
Cux2P70298 AC167019.2-201ENSMUST00000227335 845 ntBASIC17.38■□□□□ 0.37
Cux2P70298 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cux2P70298 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC17.38■□□□□ 0.37
Cux2P70298 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Gm43165-201ENSMUST00000200842 1635 ntBASIC17.38■□□□□ 0.37
Cux2P70298 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cux2P70298 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cux2P70298 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cux2P70298 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Gm22900-201ENSMUST00000104538 130 ntBASIC17.38■□□□□ 0.37
Cux2P70298 Gm8216-201ENSMUST00000117232 601 ntBASIC17.38■□□□□ 0.37
Cux2P70298 Gm23081-201ENSMUST00000157845 297 ntBASIC17.38■□□□□ 0.37
Cux2P70298 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC17.38■□□□□ 0.37
Cux2P70298 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC17.38■□□□□ 0.37
Cux2P70298 Gm17815-201ENSMUST00000198305 895 ntBASIC17.38■□□□□ 0.37
Cux2P70298 Gm8083-201ENSMUST00000203976 475 ntBASIC17.38■□□□□ 0.37
Cux2P70298 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Apoc3-201ENSMUST00000034586 526 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cux2P70298 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cux2P70298 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cux2P70298 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Cux2P70298 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cux2P70298 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cux2P70298 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cux2P70298 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC17.37■□□□□ 0.37
Cux2P70298 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cux2P70298 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cux2P70298 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC17.37■□□□□ 0.37
Cux2P70298 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC17.37■□□□□ 0.37
Cux2P70298 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC17.37■□□□□ 0.37
Cux2P70298 Gm29485-201ENSMUST00000190220 282 ntBASIC17.37■□□□□ 0.37
Cux2P70298 Gm38153-201ENSMUST00000195484 472 ntBASIC17.37■□□□□ 0.37
Cux2P70298 Gm18894-201ENSMUST00000198794 694 ntBASIC17.37■□□□□ 0.37
Cux2P70298 Gm7210-201ENSMUST00000209309 1067 ntBASIC17.37■□□□□ 0.37
Cux2P70298 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cux2P70298 AC122356.2-201ENSMUST00000226962 820 ntBASIC17.37■□□□□ 0.37
Cux2P70298 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms