Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm16441-201ENSMUST00000138176 924 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 Gm6038-201ENSMUST00000154310 948 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 Gm9574-201ENSMUST00000173127 845 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 Gm2345-201ENSMUST00000193451 589 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Gm6518-201ENSMUST00000208450 342 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ybx1P62960 Gm5513-201ENSMUST00000072982 1218 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ybx1P62960 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Ybx1P62960 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Ybx1P62960 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ybx1P62960 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Ybx1P62960 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Gm24933-201ENSMUST00000103762 110 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Gm23252-201ENSMUST00000103776 110 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Gm13171-201ENSMUST00000117233 391 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Mir1941-201ENSMUST00000157834 83 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Gm23582-201ENSMUST00000158530 139 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 Gm26443-201ENSMUST00000179610 110 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Gm7765-201ENSMUST00000182585 974 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.11□□□□□ -0.63
Ybx1P62960 Gm37319-201ENSMUST00000193500 636 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Gm43097-201ENSMUST00000196867 151 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Gm10238-201ENSMUST00000089689 408 ntBASIC11.11□□□□□ -0.63
Ybx1P62960 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.11□□□□□ -0.63
Ybx1P62960 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ybx1P62960 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ybx1P62960 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ybx1P62960 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ybx1P62960 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.1□□□□□ -0.63
Ybx1P62960 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.1□□□□□ -0.63
Ybx1P62960 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms