Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC9.52□□□□□ -0.89
Lsm6P62313 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Lsm6P62313 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.52□□□□□ -0.89
Lsm6P62313 Gm39288-201ENSMUST00000210554 446 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Lsm6P62313 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Lsm6P62313 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
Lsm6P62313 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Lsm6P62313 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Lsm6P62313 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.52□□□□□ -0.89
Lsm6P62313 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Lsm6P62313 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC9.52□□□□□ -0.89
Lsm6P62313 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC9.51□□□□□ -0.89
Lsm6P62313 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Lsm6P62313 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.51□□□□□ -0.89
Lsm6P62313 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
Lsm6P62313 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Lsm6P62313 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Snord23-201ENSMUST00000116828 109 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm12616-201ENSMUST00000118594 382 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm14460-201ENSMUST00000121511 639 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.51□□□□□ -0.89
Lsm6P62313 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.51□□□□□ -0.89
Lsm6P62313 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm18159-201ENSMUST00000174516 1070 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm19459-201ENSMUST00000176240 835 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm12624-201ENSMUST00000177615 382 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm12621-201ENSMUST00000177760 382 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm12615-201ENSMUST00000177970 382 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm12622-201ENSMUST00000177975 382 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm12627-201ENSMUST00000178412 382 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm12625-201ENSMUST00000179122 382 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm12614-201ENSMUST00000179586 382 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm12613-201ENSMUST00000180323 382 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.51□□□□□ -0.89
Lsm6P62313 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm33080-201ENSMUST00000205429 172 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 AC165154.1-201ENSMUST00000226661 340 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm7589-201ENSMUST00000085631 534 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm6P62313 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Lsm6P62313 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.51□□□□□ -0.89
Lsm6P62313 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Lsm6P62313 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm6P62313 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms