Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vps33bP59016 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vps33bP59016 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps33bP59016 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC13.56□□□□□ -0.24
Vps33bP59016 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Gm8163-201ENSMUST00000122020 1060 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps33bP59016 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps33bP59016 Gm7847-201ENSMUST00000151645 777 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Vps33bP59016 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps33bP59016 Mir8104-201ENSMUST00000185165 101 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 Gm8918-201ENSMUST00000190587 1087 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC13.56□□□□□ -0.24
Vps33bP59016 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 Ighv5-1-201ENSMUST00000193324 353 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 Gm7815-201ENSMUST00000196104 832 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Vps33bP59016 AC129590.1-201ENSMUST00000225573 852 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 AC242269.1-201ENSMUST00000227020 741 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 n-R5s5-201ENSMUST00000083134 119 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Gm8848-201ENSMUST00000197270 1343 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.56□□□□□ -0.24
Vps33bP59016 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps33bP59016 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps33bP59016 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps33bP59016 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Gm12961-201ENSMUST00000120507 1050 ntBASIC13.55□□□□□ -0.24
Vps33bP59016 Gm12570-201ENSMUST00000122047 1030 ntBASIC13.55□□□□□ -0.24
Vps33bP59016 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Vps33bP59016 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps33bP59016 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Gm6946-201ENSMUST00000182237 987 ntBASIC13.55□□□□□ -0.24
Vps33bP59016 Gm28180-201ENSMUST00000189608 722 ntBASIC13.55□□□□□ -0.24
Vps33bP59016 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps33bP59016 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC13.55□□□□□ -0.24
Vps33bP59016 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps33bP59016 Gm7727-201ENSMUST00000219830 671 ntBASIC13.55□□□□□ -0.24
Vps33bP59016 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC13.55□□□□□ -0.24
Vps33bP59016 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vps33bP59016 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vps33bP59016 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps33bP59016 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vps33bP59016 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Vps33bP59016 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Gm44975-201ENSMUST00000207435 1390 ntBASIC13.55□□□□□ -0.24
Vps33bP59016 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps33bP59016 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Vps33bP59016 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC13.55□□□□□ -0.24
Vps33bP59016 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps33bP59016 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps33bP59016 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vps33bP59016 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps33bP59016 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps33bP59016 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps33bP59016 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps33bP59016 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms