Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Mir1249-201ENSMUST00000116791 98 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Gm24140-201ENSMUST00000122773 326 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.83□□□□□ -0.68
Atxn1P54254 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Gm7805-201ENSMUST00000154348 448 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Gm24312-201ENSMUST00000178677 119 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.83□□□□□ -0.68
Atxn1P54254 Gm5254-201ENSMUST00000188353 977 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Gm29067-201ENSMUST00000190821 470 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Gm19918-201ENSMUST00000194858 400 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Gm38314-201ENSMUST00000195709 625 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 AC124613.1-201ENSMUST00000198711 88 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.83□□□□□ -0.68
Atxn1P54254 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Gm10254-201ENSMUST00000052888 867 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Mir341-201ENSMUST00000093593 96 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Atxn1P54254 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.83□□□□□ -0.68
Atxn1P54254 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
Atxn1P54254 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC10.82□□□□□ -0.68
Atxn1P54254 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Gm43117-201ENSMUST00000198531 379 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Gm43106-201ENSMUST00000199485 637 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Gm43966-201ENSMUST00000203301 612 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Gm9644-201ENSMUST00000212828 1183 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.82□□□□□ -0.68
Atxn1P54254 AC154461.1-201ENSMUST00000224207 1005 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Atxn1P54254 Gm8420-201ENSMUST00000097103 598 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Atxn1P54254 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Atxn1P54254 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Gm8968-201ENSMUST00000199133 1303 ntBASIC10.82□□□□□ -0.68
Atxn1P54254 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atxn1P54254 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.81□□□□□ -0.68
Atxn1P54254 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.81□□□□□ -0.68
Atxn1P54254 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms