Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdx1P52946 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Pdx1P52946 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.69□□□□□ -0.7
Pdx1P52946 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Pdx1P52946 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Pdx1P52946 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Pdx1P52946 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC10.69□□□□□ -0.7
Pdx1P52946 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Pdx1P52946 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.69□□□□□ -0.7
Pdx1P52946 Mir1905-201ENSMUST00000122779 82 ntBASIC10.69□□□□□ -0.7
Pdx1P52946 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.69□□□□□ -0.7
Pdx1P52946 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pdx1P52946 Gm9135-201ENSMUST00000182963 990 ntBASIC10.69□□□□□ -0.7
Pdx1P52946 Gm7985-201ENSMUST00000183329 981 ntBASIC10.69□□□□□ -0.7
Pdx1P52946 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.69□□□□□ -0.7
Pdx1P52946 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.69□□□□□ -0.7
Pdx1P52946 Gm19091-201ENSMUST00000208120 978 ntBASIC10.69□□□□□ -0.7
Pdx1P52946 Gm7600-201ENSMUST00000209657 785 ntBASIC10.69□□□□□ -0.7
Pdx1P52946 Gm5178-201ENSMUST00000219380 898 ntBASIC10.69□□□□□ -0.7
Pdx1P52946 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Pdx1P52946 Gm5805-201ENSMUST00000072779 456 ntBASIC10.69□□□□□ -0.7
Pdx1P52946 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Pdx1P52946 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Pdx1P52946 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pdx1P52946 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pdx1P52946 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdx1P52946 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pdx1P52946 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.68□□□□□ -0.7
Pdx1P52946 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
Pdx1P52946 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Gm25053-201ENSMUST00000103982 133 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Gm25922-201ENSMUST00000104281 130 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.68□□□□□ -0.7
Pdx1P52946 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.68□□□□□ -0.7
Pdx1P52946 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pdx1P52946 Gm24679-201ENSMUST00000158762 111 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Gm17221-201ENSMUST00000163909 481 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Gm17073-201ENSMUST00000168069 556 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Gm28324-201ENSMUST00000187913 264 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Gm38210-201ENSMUST00000191944 809 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.68□□□□□ -0.7
Pdx1P52946 Gm25053-202ENSMUST00000199731 132 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Gm44216-201ENSMUST00000203942 157 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 Gm45219-201ENSMUST00000205602 465 ntBASIC10.68□□□□□ -0.7
Pdx1P52946 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.68□□□□□ -0.7
Pdx1P52946 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pdx1P52946 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pdx1P52946 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdx1P52946 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdx1P52946 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms