Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Shmt1P50431 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Gm12745-201ENSMUST00000121767 214 ntBASIC11.45□□□□□ -0.58
Shmt1P50431 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.45□□□□□ -0.58
Shmt1P50431 Gm17214-201ENSMUST00000164501 541 ntBASIC11.45□□□□□ -0.58
Shmt1P50431 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Gm17070-201ENSMUST00000170463 784 ntBASIC11.45□□□□□ -0.58
Shmt1P50431 Gm9574-201ENSMUST00000173127 845 ntBASIC11.45□□□□□ -0.58
Shmt1P50431 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Gm27441-201ENSMUST00000185000 105 ntBASIC11.45□□□□□ -0.58
Shmt1P50431 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.45□□□□□ -0.58
Shmt1P50431 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Shmt1P50431 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.45□□□□□ -0.58
Shmt1P50431 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.45□□□□□ -0.58
Shmt1P50431 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Shmt1P50431 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Shmt1P50431 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.45□□□□□ -0.58
Shmt1P50431 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shmt1P50431 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.44□□□□□ -0.58
Shmt1P50431 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
Shmt1P50431 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Shmt1P50431 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Gm15136-201ENSMUST00000120552 533 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.44□□□□□ -0.58
Shmt1P50431 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Mir6923-201ENSMUST00000184592 72 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Gm37852-201ENSMUST00000193027 350 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Gm5870-201ENSMUST00000196461 282 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Gm5865-201ENSMUST00000198713 637 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Gm43969-201ENSMUST00000204833 535 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Shmt1P50431 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.44□□□□□ -0.58
Shmt1P50431 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.44□□□□□ -0.58
Shmt1P50431 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Shmt1P50431 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Shmt1P50431 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.44□□□□□ -0.58
Shmt1P50431 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Shmt1P50431 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Shmt1P50431 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Shmt1P50431 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Shmt1P50431 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Shmt1P50431 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shmt1P50431 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms