Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Gm11473-201ENSMUST00000118980 359 ntBASIC9.47□□□□□ -0.89
TgfaP48030 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC9.47□□□□□ -0.89
TgfaP48030 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.47□□□□□ -0.89
TgfaP48030 Gm6686-201ENSMUST00000178455 258 ntBASIC9.47□□□□□ -0.89
TgfaP48030 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC9.47□□□□□ -0.89
TgfaP48030 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC9.47□□□□□ -0.89
TgfaP48030 Gm38233-201ENSMUST00000194259 807 ntBASIC9.47□□□□□ -0.89
TgfaP48030 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC9.47□□□□□ -0.89
TgfaP48030 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC9.47□□□□□ -0.89
TgfaP48030 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC9.47□□□□□ -0.89
TgfaP48030 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.47□□□□□ -0.89
TgfaP48030 AC133517.1-201ENSMUST00000225825 594 ntBASIC9.47□□□□□ -0.89
TgfaP48030 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC9.47□□□□□ -0.89
TgfaP48030 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.47□□□□□ -0.89
TgfaP48030 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
TgfaP48030 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
TgfaP48030 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 AC153524.2-202ENSMUST00000220401 1794 ntBASIC9.47□□□□□ -0.89
TgfaP48030 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TgfaP48030 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.46□□□□□ -0.89
TgfaP48030 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
TgfaP48030 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
TgfaP48030 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.46□□□□□ -0.89
TgfaP48030 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TgfaP48030 Gm10537-201ENSMUST00000192625 1698 ntBASIC9.46□□□□□ -0.89
TgfaP48030 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
TgfaP48030 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
TgfaP48030 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TgfaP48030 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
TgfaP48030 Gm11736-201ENSMUST00000121468 505 ntBASIC9.46□□□□□ -0.9
TgfaP48030 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Gm4868-201ENSMUST00000164138 789 ntBASIC9.46□□□□□ -0.9
TgfaP48030 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC9.46□□□□□ -0.9
TgfaP48030 Gm38007-201ENSMUST00000192187 313 ntBASIC9.46□□□□□ -0.9
TgfaP48030 Gm42687-201ENSMUST00000199075 164 ntBASIC9.46□□□□□ -0.9
TgfaP48030 Gm42859-201ENSMUST00000199572 193 ntBASIC9.46□□□□□ -0.9
TgfaP48030 Gm5311-201ENSMUST00000203518 709 ntBASIC9.46□□□□□ -0.9
TgfaP48030 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Gm18256-201ENSMUST00000209087 907 ntBASIC9.46□□□□□ -0.9
TgfaP48030 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.46□□□□□ -0.9
TgfaP48030 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC9.46□□□□□ -0.9
TgfaP48030 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Gm10238-201ENSMUST00000089689 408 ntBASIC9.46□□□□□ -0.9
TgfaP48030 Gm10581-201ENSMUST00000097986 231 ntBASIC9.46□□□□□ -0.9
TgfaP48030 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
TgfaP48030 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
TgfaP48030 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.46□□□□□ -0.9
TgfaP48030 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
TgfaP48030 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms