Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.77□□□□□ -0.68
Sox18P43680 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox18P43680 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Sox18P43680 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox18P43680 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox18P43680 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox18P43680 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Sox18P43680 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox18P43680 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox18P43680 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Sox18P43680 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.77□□□□□ -0.68
Sox18P43680 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox18P43680 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Gm23132-201ENSMUST00000104254 132 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Gm15528-201ENSMUST00000117821 864 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Gm9164-201ENSMUST00000118700 1014 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Gm12748-201ENSMUST00000120763 504 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Gm26313-201ENSMUST00000157770 308 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Gm22388-201ENSMUST00000158194 248 ntBASIC10.77□□□□□ -0.69
Sox18P43680 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.77□□□□□ -0.69
Sox18P43680 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Gm4775-201ENSMUST00000169588 402 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Gm25872-201ENSMUST00000177784 100 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Gm44837-201ENSMUST00000206863 717 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC10.77□□□□□ -0.69
Sox18P43680 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Sox18P43680 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Sox18P43680 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Sox18P43680 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.77□□□□□ -0.69
Sox18P43680 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Gm45172-201ENSMUST00000206054 1301 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Sox18P43680 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sox18P43680 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.77□□□□□ -0.69
Sox18P43680 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox18P43680 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
Sox18P43680 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sox18P43680 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 AC022682.1-201ENSMUST00000224624 2023 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Vmn1r-ps110-201ENSMUST00000117530 1094 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Gm13732-201ENSMUST00000117753 535 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Gm11485-201ENSMUST00000120048 1175 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Gm8051-201ENSMUST00000120464 466 ntBASIC10.76□□□□□ -0.69
Sox18P43680 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 4930430E12Rik-201ENSMUST00000139214 901 ntTSL 5 BASIC10.76□□□□□ -0.69
Sox18P43680 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Sox18P43680 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sox18P43680 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sox18P43680 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.76□□□□□ -0.69
Sox18P43680 Gm6114-201ENSMUST00000182472 968 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms