Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.25□□□□□ -0.29
Nkx1-2P42580 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.25□□□□□ -0.29
Nkx1-2P42580 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.25□□□□□ -0.29
Nkx1-2P42580 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm43520-201ENSMUST00000197996 164 ntBASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm5865-201ENSMUST00000198713 637 ntBASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm9132-201ENSMUST00000210182 832 ntBASIC13.25□□□□□ -0.29
Nkx1-2P42580 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Id2-203ENSMUST00000222667 958 ntBASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.25□□□□□ -0.29
Nkx1-2P42580 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm25580-201ENSMUST00000083409 327 ntBASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Gm28624-201ENSMUST00000186430 2131 ntBASIC13.25□□□□□ -0.29
Nkx1-2P42580 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx1-2P42580 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC13.24□□□□□ -0.29
Nkx1-2P42580 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.24□□□□□ -0.29
Nkx1-2P42580 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.24□□□□□ -0.29
Nkx1-2P42580 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nkx1-2P42580 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.24□□□□□ -0.29
Nkx1-2P42580 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Gm21142-201ENSMUST00000179999 2604 ntBASIC13.24□□□□□ -0.29
Nkx1-2P42580 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx1-2P42580 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx1-2P42580 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Gm6485-201ENSMUST00000160676 439 ntBASIC13.23□□□□□ -0.29
Nkx1-2P42580 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Gm7985-201ENSMUST00000183329 981 ntBASIC13.23□□□□□ -0.29
Nkx1-2P42580 Mir6979-201ENSMUST00000183927 56 ntBASIC13.23□□□□□ -0.29
Nkx1-2P42580 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.23□□□□□ -0.29
Nkx1-2P42580 Gm43378-201ENSMUST00000199336 582 ntBASIC13.23□□□□□ -0.29
Nkx1-2P42580 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Gm44551-201ENSMUST00000208804 171 ntBASIC13.23□□□□□ -0.29
Nkx1-2P42580 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx1-2P42580 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms