Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Gm13437-201ENSMUST00000122434 1981 ntBASIC12.58□□□□□ -0.4
Traf1P39428 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Gm23745-201ENSMUST00000104230 125 ntBASIC12.58□□□□□ -0.4
Traf1P39428 Gm14274-201ENSMUST00000117182 615 ntBASIC12.58□□□□□ -0.4
Traf1P39428 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.58□□□□□ -0.4
Traf1P39428 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Traf1P39428 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Traf1P39428 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.58□□□□□ -0.4
Traf1P39428 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.58□□□□□ -0.4
Traf1P39428 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.58□□□□□ -0.4
Traf1P39428 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.58□□□□□ -0.4
Traf1P39428 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.58□□□□□ -0.4
Traf1P39428 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Traf1P39428 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Traf1P39428 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.58□□□□□ -0.4
Traf1P39428 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Traf1P39428 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Traf1P39428 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.57□□□□□ -0.4
Traf1P39428 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Traf1P39428 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.57□□□□□ -0.4
Traf1P39428 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.57□□□□□ -0.4
Traf1P39428 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.57□□□□□ -0.4
Traf1P39428 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Gm15136-201ENSMUST00000120552 533 ntBASIC12.57□□□□□ -0.4
Traf1P39428 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.57□□□□□ -0.4
Traf1P39428 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Gm9507-202ENSMUST00000180157 654 ntBASIC12.57□□□□□ -0.4
Traf1P39428 Gm18801-201ENSMUST00000186616 536 ntBASIC12.57□□□□□ -0.4
Traf1P39428 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.57□□□□□ -0.4
Traf1P39428 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Gm8162-201ENSMUST00000213951 665 ntBASIC12.57□□□□□ -0.4
Traf1P39428 BC106175-202ENSMUST00000219344 1213 ntBASIC12.57□□□□□ -0.4
Traf1P39428 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.57□□□□□ -0.4
Traf1P39428 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.57□□□□□ -0.4
Traf1P39428 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Traf1P39428 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Traf1P39428 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Traf1P39428 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Traf1P39428 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Traf1P39428 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf1P39428 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Traf1P39428 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf1P39428 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.56□□□□□ -0.4
Traf1P39428 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf1P39428 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Traf1P39428 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf1P39428 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf1P39428 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf1P39428 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
Traf1P39428 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Traf1P39428 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf1P39428 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf1P39428 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf1P39428 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf1P39428 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.56□□□□□ -0.4
Traf1P39428 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms