Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm42859-201ENSMUST00000199572 193 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 Gm43811-201ENSMUST00000202862 695 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vcam1P29533 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 AC154197.1-201ENSMUST00000225136 1382 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.4□□□□□ -0.42
Vcam1P29533 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vcam1P29533 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.4□□□□□ -0.42
Vcam1P29533 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Klf10-203ENSMUST00000227920 2144 ntBASIC12.4□□□□□ -0.42
Vcam1P29533 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vcam1P29533 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vcam1P29533 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.4□□□□□ -0.42
Vcam1P29533 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Gm26943-201ENSMUST00000182295 957 ntBASIC12.4□□□□□ -0.42
Vcam1P29533 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.4□□□□□ -0.42
Vcam1P29533 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.4□□□□□ -0.42
Vcam1P29533 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vcam1P29533 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Vcam1P29533 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.4□□□□□ -0.42
Vcam1P29533 AC154431.1-201ENSMUST00000224910 880 ntBASIC12.4□□□□□ -0.42
Vcam1P29533 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.4□□□□□ -0.42
Vcam1P29533 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC12.4□□□□□ -0.42
Vcam1P29533 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Vcam1P29533 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.4□□□□□ -0.42
Vcam1P29533 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.4□□□□□ -0.42
Vcam1P29533 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vcam1P29533 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vcam1P29533 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vcam1P29533 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
Vcam1P29533 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vcam1P29533 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC12.4□□□□□ -0.43
Vcam1P29533 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Vcam1P29533 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vcam1P29533 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Vcam1P29533 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Gm4865-201ENSMUST00000196284 1309 ntBASIC12.39□□□□□ -0.43
Vcam1P29533 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.39□□□□□ -0.43
Vcam1P29533 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Gm14231-201ENSMUST00000120090 592 ntBASIC12.39□□□□□ -0.43
Vcam1P29533 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.39□□□□□ -0.43
Vcam1P29533 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC12.39□□□□□ -0.43
Vcam1P29533 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Vcam1P29533 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.39□□□□□ -0.43
Vcam1P29533 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.39□□□□□ -0.43
Vcam1P29533 Gm37944-201ENSMUST00000194233 414 ntBASIC12.39□□□□□ -0.43
Vcam1P29533 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC12.39□□□□□ -0.43
Vcam1P29533 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.39□□□□□ -0.43
Vcam1P29533 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.39□□□□□ -0.43
Vcam1P29533 AC140314.1-201ENSMUST00000219549 554 ntBASIC12.39□□□□□ -0.43
Vcam1P29533 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC12.39□□□□□ -0.43
Vcam1P29533 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vcam1P29533 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.39□□□□□ -0.43
Vcam1P29533 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vcam1P29533 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms