Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm12795-201ENSMUST00000117594 539 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm11573-201ENSMUST00000119956 394 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm17221-201ENSMUST00000163909 481 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm17073-201ENSMUST00000168069 556 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm26976-201ENSMUST00000182929 908 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm28975-201ENSMUST00000186412 686 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm18514-201ENSMUST00000218980 436 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Capsl-202ENSMUST00000226688 739 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Tnfrsf1bP25119 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm25653-201ENSMUST00000158473 138 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm5529-201ENSMUST00000165691 891 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm17192-201ENSMUST00000169031 511 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Mir8091-201ENSMUST00000183602 139 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm7880-201ENSMUST00000203748 871 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm45072-201ENSMUST00000208673 929 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf1bP25119 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf1bP25119 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms