Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm29076-201ENSMUST00000187689 697 ntBASIC7.87□□□□□ -1.15
TcraP01849 Gm28302-201ENSMUST00000187931 697 ntBASIC7.87□□□□□ -1.15
TcraP01849 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC7.87□□□□□ -1.15
TcraP01849 Gm28646-201ENSMUST00000188220 697 ntBASIC7.87□□□□□ -1.15
TcraP01849 Gm28205-201ENSMUST00000189177 697 ntBASIC7.87□□□□□ -1.15
TcraP01849 Gm8885-201ENSMUST00000189382 598 ntBASIC7.87□□□□□ -1.15
TcraP01849 Gm29032-201ENSMUST00000189797 697 ntBASIC7.87□□□□□ -1.15
TcraP01849 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC7.87□□□□□ -1.15
TcraP01849 Gm28695-201ENSMUST00000190300 697 ntBASIC7.87□□□□□ -1.15
TcraP01849 Gm37448-201ENSMUST00000192795 697 ntBASIC7.87□□□□□ -1.15
TcraP01849 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC7.87□□□□□ -1.15
TcraP01849 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC7.87□□□□□ -1.15
TcraP01849 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TcraP01849 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TcraP01849 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Olfr582-201ENSMUST00000098212 960 ntBASIC7.87□□□□□ -1.15
TcraP01849 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TcraP01849 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TcraP01849 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Gm37307-201ENSMUST00000193663 2621 ntBASIC7.87□□□□□ -1.15
TcraP01849 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Gm45289-201ENSMUST00000211048 2577 ntBASIC7.87□□□□□ -1.15
TcraP01849 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TcraP01849 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC7.87□□□□□ -1.15
TcraP01849 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TcraP01849 Gm38005-201ENSMUST00000194845 2745 ntBASIC7.87□□□□□ -1.15
TcraP01849 Gm44914-201ENSMUST00000207191 2720 ntBASIC7.87□□□□□ -1.15
TcraP01849 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TcraP01849 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
TcraP01849 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
TcraP01849 Gm42608-201ENSMUST00000197563 2018 ntBASIC7.86□□□□□ -1.15
TcraP01849 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC7.86□□□□□ -1.15
TcraP01849 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
TcraP01849 AC156802.2-203ENSMUST00000226032 1906 ntBASIC7.86□□□□□ -1.15
TcraP01849 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
TcraP01849 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC7.86□□□□□ -1.15
TcraP01849 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
TcraP01849 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC7.86□□□□□ -1.15
TcraP01849 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
TcraP01849 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC7.86□□□□□ -1.15
TcraP01849 Gm44798-201ENSMUST00000208123 2410 ntBASIC7.86□□□□□ -1.15
TcraP01849 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
TcraP01849 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
TcraP01849 Gm11941-201ENSMUST00000119904 610 ntBASIC7.86□□□□□ -1.15
TcraP01849 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Gm7150-201ENSMUST00000122032 981 ntBASIC7.86□□□□□ -1.15
TcraP01849 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC7.86□□□□□ -1.15
TcraP01849 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC7.86□□□□□ -1.15
TcraP01849 Gm24074-201ENSMUST00000158178 260 ntBASIC7.86□□□□□ -1.15
TcraP01849 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC7.86□□□□□ -1.15
TcraP01849 Gm20495-201ENSMUST00000173902 235 ntBASIC7.86□□□□□ -1.15
TcraP01849 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
TcraP01849 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
TcraP01849 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Mir8109-201ENSMUST00000184375 117 ntBASIC7.86□□□□□ -1.15
TcraP01849 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TcraP01849 Gm43758-201ENSMUST00000199500 367 ntBASIC7.86□□□□□ -1.15
TcraP01849 Gm7118-201ENSMUST00000200167 1003 ntBASIC7.86□□□□□ -1.15
TcraP01849 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC7.86□□□□□ -1.15
TcraP01849 Gm17812-201ENSMUST00000204935 318 ntBASIC7.86□□□□□ -1.15
TcraP01849 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms