Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 AC153524.2-202ENSMUST00000220401 1794 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm16470-201ENSMUST00000182456 998 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm5274-201ENSMUST00000182641 1003 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm27953-201ENSMUST00000185171 143 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm28381-201ENSMUST00000188403 193 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm43833-201ENSMUST00000198828 293 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm8420-201ENSMUST00000097103 598 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm8806-201ENSMUST00000120076 1407 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 AC125487.1-201ENSMUST00000217888 1300 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 A1cf-204ENSMUST00000224564 1432 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Mup-ps29-201ENSMUST00000122281 202 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Platr10-202ENSMUST00000191479 818 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm6342-201ENSMUST00000204344 766 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 AC156274.1-201ENSMUST00000219193 634 ntBASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp9yF8VPU6 Gm38376-201ENSMUST00000195493 2253 ntBASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Gm13623-201ENSMUST00000118359 625 ntBASIC8.62□□□□□ -1.03
Usp9yF8VPU6 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Gm5472-201ENSMUST00000178604 1678 ntBASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp9yF8VPU6 Gm14650-201ENSMUST00000120400 889 ntBASIC8.62□□□□□ -1.03
Usp9yF8VPU6 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms