Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12□□□□□ -0.49
Brpf3B2KF05 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Gm12419-201ENSMUST00000116649 636 ntBASIC12□□□□□ -0.49
Brpf3B2KF05 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12□□□□□ -0.49
Brpf3B2KF05 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12□□□□□ -0.49
Brpf3B2KF05 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Brpf3B2KF05 Gm23085-201ENSMUST00000157849 293 ntBASIC12□□□□□ -0.49
Brpf3B2KF05 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Brpf3B2KF05 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC12□□□□□ -0.49
Brpf3B2KF05 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Brpf3B2KF05 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12□□□□□ -0.49
Brpf3B2KF05 Gm44364-201ENSMUST00000198368 141 ntBASIC12□□□□□ -0.49
Brpf3B2KF05 Gm45310-201ENSMUST00000210436 275 ntBASIC12□□□□□ -0.49
Brpf3B2KF05 AC159376.1-201ENSMUST00000218504 630 ntBASIC12□□□□□ -0.49
Brpf3B2KF05 CT572999.1-201ENSMUST00000220315 1260 ntBASIC12□□□□□ -0.49
Brpf3B2KF05 Gm9826-201ENSMUST00000029124 1299 ntBASIC12□□□□□ -0.49
Brpf3B2KF05 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12□□□□□ -0.49
Brpf3B2KF05 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Brpf3B2KF05 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Brpf3B2KF05 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Brpf3B2KF05 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brpf3B2KF05 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Brpf3B2KF05 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.99□□□□□ -0.49
Brpf3B2KF05 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gm43186-201ENSMUST00000198130 824 ntBASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gm2517-201ENSMUST00000215651 348 ntBASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.99□□□□□ -0.49
Brpf3B2KF05 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.99□□□□□ -0.49
Brpf3B2KF05 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Brpf3B2KF05 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.98□□□□□ -0.49
Brpf3B2KF05 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brpf3B2KF05 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Brpf3B2KF05 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brpf3B2KF05 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms