Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Gm14942-201ENSMUST00000119642 336 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Gm44545-201ENSMUST00000208262 746 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Gm45550-201ENSMUST00000209380 946 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Mt1-202ENSMUST00000211807 1085 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 AC165260.2-203ENSMUST00000224237 336 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.8□□□□□ -0.84
Sec61a2Q9JLR1 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm11573-201ENSMUST00000119956 394 ntBASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 n-R5s84-201ENSMUST00000122591 109 ntBASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm24074-201ENSMUST00000158178 260 ntBASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm2875-201ENSMUST00000211333 360 ntBASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.79□□□□□ -0.84
Sec61a2Q9JLR1 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sec61a2Q9JLR1 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms