Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpne8Q9DC53 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm15264-201ENSMUST00000118050 502 ntBASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm14497-201ENSMUST00000119537 580 ntBASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm12029-201ENSMUST00000120073 832 ntBASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm42816-201ENSMUST00000198433 325 ntBASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm8959-201ENSMUST00000213150 571 ntBASIC11.24□□□□□ -0.61
Cpne8Q9DC53 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpne8Q9DC53 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm24398-201ENSMUST00000157870 109 ntBASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Mir6407-201ENSMUST00000184510 101 ntBASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.23□□□□□ -0.61
Cpne8Q9DC53 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.23□□□□□ -0.61
Cpne8Q9DC53 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cpne8Q9DC53 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms