Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Klf8-201ENSMUST00000039545 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Gm16299-201ENSMUST00000162724 2766 ntTSL 3 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Gm37597-201ENSMUST00000191853 382 ntBASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Gm44323-201ENSMUST00000198689 129 ntBASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 AC159246.1-201ENSMUST00000214478 249 ntBASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Pnisr-203ENSMUST00000108229 2922 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Bmf-202ENSMUST00000110859 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Olfr1090-203ENSMUST00000217043 2054 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Gtf3c6Q9D8P7 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Lpar1-202ENSMUST00000107570 3244 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Mir1896-201ENSMUST00000122641 81 ntBASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 AC116487.1-201ENSMUST00000227033 339 ntBASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Tcf24-201ENSMUST00000097824 2639 ntBASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Ftsj3-201ENSMUST00000021048 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Cyb5d2-203ENSMUST00000156294 2158 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Gm42608-201ENSMUST00000197563 2018 ntBASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gtf3c6Q9D8P7 Gm16026-206ENSMUST00000163068 2741 ntBASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Gm9133-201ENSMUST00000118289 540 ntBASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Gm11331-201ENSMUST00000119764 288 ntBASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Gm26461-201ENSMUST00000175064 290 ntBASIC11.8□□□□□ -0.52
Gtf3c6Q9D8P7 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms