Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm9111-201ENSMUST00000219394 709 ntBASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 Gm10020-201ENSMUST00000081993 612 ntBASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 CT009601.1-201ENSMUST00000225567 2705 ntBASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp4cQ9D7F7 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Gm16219-201ENSMUST00000120096 274 ntBASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Gm28746-201ENSMUST00000187453 380 ntBASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Gm28693-201ENSMUST00000189622 2638 ntBASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp4cQ9D7F7 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Gm44103-201ENSMUST00000204364 3662 ntBASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Gm9645-201ENSMUST00000197131 792 ntBASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp4cQ9D7F7 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp4cQ9D7F7 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms