Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Gm25580-201ENSMUST00000083409 327 ntBASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Khdc3Q9CWU5 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm12616-201ENSMUST00000118594 382 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm24398-201ENSMUST00000157870 109 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm12624-201ENSMUST00000177615 382 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm12621-201ENSMUST00000177760 382 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm12615-201ENSMUST00000177970 382 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm12622-201ENSMUST00000177975 382 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm12627-201ENSMUST00000178412 382 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm12625-201ENSMUST00000179122 382 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm12614-201ENSMUST00000179586 382 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm12613-201ENSMUST00000180323 382 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm30671-201ENSMUST00000214898 318 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Khdc3Q9CWU5 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Khdc3Q9CWU5 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Khdc3Q9CWU5 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Khdc3Q9CWU5 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Khdc3Q9CWU5 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Khdc3Q9CWU5 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Khdc3Q9CWU5 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Khdc3Q9CWU5 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Khdc3Q9CWU5 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms