Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm14539-201ENSMUST00000117527 174 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm12345-201ENSMUST00000119288 898 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm16441-201ENSMUST00000138176 924 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm8464-202ENSMUST00000146697 1142 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm4750-201ENSMUST00000151942 1142 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm6038-201ENSMUST00000154310 948 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm6216-201ENSMUST00000182390 687 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm22341-201ENSMUST00000083775 129 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx6-1Q99MA9 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Gm11919-201ENSMUST00000117609 721 ntBASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Gm6238-201ENSMUST00000120999 465 ntBASIC10.28□□□□□ -0.76
Nkx6-1Q99MA9 Gm13688-201ENSMUST00000121557 608 ntBASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms