Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd2Q99JR8 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm8725-201ENSMUST00000221829 1333 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm13426-201ENSMUST00000117887 795 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm15815-201ENSMUST00000120569 255 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm16305-201ENSMUST00000140747 556 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm16228-201ENSMUST00000162286 809 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm22876-201ENSMUST00000175450 298 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm18466-201ENSMUST00000209147 499 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm45481-201ENSMUST00000209717 877 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Gm22341-201ENSMUST00000083775 129 ntBASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Smarcd2Q99JR8 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd2Q99JR8 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm6755-201ENSMUST00000100598 864 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm6740-201ENSMUST00000100617 864 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm12397-201ENSMUST00000117674 615 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm8226-201ENSMUST00000190511 798 ntBASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Smarcd2Q99JR8 Gm42710-201ENSMUST00000200608 985 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms