Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.2□□□□□ -0.62
Trim60Q8VI40 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.2□□□□□ -0.62
Trim60Q8VI40 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim60Q8VI40 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Gm13045-201ENSMUST00000119019 712 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 Gm13284-201ENSMUST00000121020 547 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Gm16165-201ENSMUST00000160140 795 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Mir5120-201ENSMUST00000175020 78 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 Gm25732-201ENSMUST00000175168 60 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 Mir3547-201ENSMUST00000175461 88 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Gm37905-201ENSMUST00000195310 341 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Gm40414-201ENSMUST00000197608 481 ntBASIC11.19□□□□□ -0.62
Trim60Q8VI40 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim60Q8VI40 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.18□□□□□ -0.62
Trim60Q8VI40 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.18□□□□□ -0.62
Trim60Q8VI40 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.18□□□□□ -0.62
Trim60Q8VI40 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Mir6979-201ENSMUST00000183927 56 ntBASIC11.18□□□□□ -0.62
Trim60Q8VI40 Gm19353-201ENSMUST00000184561 445 ntBASIC11.18□□□□□ -0.62
Trim60Q8VI40 Gm5599-201ENSMUST00000209602 788 ntBASIC11.18□□□□□ -0.62
Trim60Q8VI40 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.18□□□□□ -0.62
Trim60Q8VI40 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim60Q8VI40 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms