Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28aQ8CEI3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28aQ8CEI3 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28aQ8CEI3 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc28aQ8CEI3 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm4654-201ENSMUST00000183305 982 ntBASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm40414-201ENSMUST00000197608 481 ntBASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm7848-201ENSMUST00000210739 718 ntBASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28aQ8CEI3 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm23200-201ENSMUST00000104379 132 ntBASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm45398-201ENSMUST00000210561 165 ntBASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28aQ8CEI3 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28aQ8CEI3 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28aQ8CEI3 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccdc28aQ8CEI3 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28aQ8CEI3 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28aQ8CEI3 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms