Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm11411-201ENSMUST00000117951 719 ntBASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm26976-201ENSMUST00000182929 908 ntBASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm18014-201ENSMUST00000183369 817 ntBASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.92□□□□□ -0.5
Trim9Q8C7M3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm8170-201ENSMUST00000218581 945 ntBASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.91□□□□□ -0.5
Trim9Q8C7M3 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.91□□□□□ -0.5
Trim9Q8C7M3 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.91□□□□□ -0.5
Trim9Q8C7M3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim9Q8C7M3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms