Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm11996-201ENSMUST00000117538 915 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm26989-201ENSMUST00000182608 749 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm19918-201ENSMUST00000194858 400 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm17889-201ENSMUST00000198410 598 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh19Q80TF3 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm25509-201ENSMUST00000116985 106 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm14213-201ENSMUST00000119778 768 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm5257-201ENSMUST00000121823 790 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm20781-201ENSMUST00000193154 693 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm21736-201ENSMUST00000195399 693 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm33080-201ENSMUST00000205429 172 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 AC140209.1-201ENSMUST00000227875 284 ntBASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Pcdh19Q80TF3 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdh19Q80TF3 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Pcdh19Q80TF3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdh19Q80TF3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdh19Q80TF3 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Pcdh19Q80TF3 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms