Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm3828-201ENSMUST00000121817 257 ntBASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm28032-201ENSMUST00000184104 96 ntBASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm7600-201ENSMUST00000209657 785 ntBASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Casc4Q6P2L7 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Casc4Q6P2L7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Casc4Q6P2L7 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm43937-201ENSMUST00000204640 3122 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm21759-201ENSMUST00000178345 1828 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Casc4Q6P2L7 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11□□□□□ -0.65
Casc4Q6P2L7 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11□□□□□ -0.65
Casc4Q6P2L7 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm22379-201ENSMUST00000157480 131 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11□□□□□ -0.65
Casc4Q6P2L7 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Mir7032-201ENSMUST00000185154 79 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm28324-201ENSMUST00000187913 264 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm37597-201ENSMUST00000191853 382 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm42588-201ENSMUST00000200538 1297 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Casc4Q6P2L7 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm4811-201ENSMUST00000220879 1220 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11□□□□□ -0.65
Casc4Q6P2L7 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm25125-201ENSMUST00000083340 136 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Gm37368-201ENSMUST00000193173 3212 ntBASIC11□□□□□ -0.65
Casc4Q6P2L7 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Casc4Q6P2L7 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms