Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm22920-201ENSMUST00000102175 109 ntBASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Gm4917-201ENSMUST00000121452 650 ntBASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.47□□□□□ -0.57
Trim43aQ3TL54 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC11.47□□□□□ -0.57
Trim43aQ3TL54 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Gm12337-201ENSMUST00000119634 400 ntBASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.47□□□□□ -0.57
Trim43aQ3TL54 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.47□□□□□ -0.57
Trim43aQ3TL54 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim43aQ3TL54 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm8737-201ENSMUST00000122208 642 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm7666-201ENSMUST00000146631 819 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm15881-201ENSMUST00000148792 942 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm22334-201ENSMUST00000158070 133 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms