Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 AC160991.2-201ENSMUST00000223784 1135 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 AC154706.1-201ENSMUST00000225482 585 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm7493-201ENSMUST00000085919 626 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Atp5g1-204ENSMUST00000178611 4660 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Lyrm7-205ENSMUST00000144164 1674 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gpr160-201ENSMUST00000046748 1977 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm8513-201ENSMUST00000182830 1003 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm37904-201ENSMUST00000195591 312 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm17978-201ENSMUST00000195986 769 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm3176-201ENSMUST00000200920 1249 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm31941-201ENSMUST00000209689 350 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm18500-201ENSMUST00000223493 820 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm7936-201ENSMUST00000069529 375 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm38346-201ENSMUST00000192379 2639 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm45416-201ENSMUST00000209713 2201 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm13564-201ENSMUST00000131533 657 ntTSL 3 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm6425-201ENSMUST00000136332 790 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Zfp87-203ENSMUST00000181573 382 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm7132-201ENSMUST00000182302 984 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm43310-201ENSMUST00000198975 820 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm43243-201ENSMUST00000199964 278 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 AL645704.1-201ENSMUST00000221642 604 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 AC134869.4-201ENSMUST00000224724 609 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Homer1-201ENSMUST00000060490 2765 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 CT572998.1-201ENSMUST00000219636 1557 ntTSL 3 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 AC132384.7-201ENSMUST00000220198 1391 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Gm6989-201ENSMUST00000218409 654 ntBASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Reg4-201ENSMUST00000029469 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Mkl2-202ENSMUST00000056715 618 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Retnlg-201ENSMUST00000065666 608 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Mrgprx1-201ENSMUST00000094390 1180 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC5.49□□□□□ -1.53
Ush2AQ2QI47 Elavl2-203ENSMUST00000107109 1591 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Elavl2-205ENSMUST00000107111 1552 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Lrp1b-207ENSMUST00000142688 2911 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Gm22150-201ENSMUST00000104447 135 ntBASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Gm12751-201ENSMUST00000122336 381 ntBASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Gm17097-201ENSMUST00000166414 714 ntBASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Gm6967-201ENSMUST00000182599 1007 ntBASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Gm19843-201ENSMUST00000198144 772 ntBASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 AC159106.2-201ENSMUST00000223732 486 ntBASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Lect2-202ENSMUST00000225183 823 ntBASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Gm10272-201ENSMUST00000092371 350 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ush2AQ2QI47 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms