Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Wbp1-209ENSMUST00000205023 716 ntBASIC12.3□□□□□ -0.44
GabpaQ00422 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.3□□□□□ -0.44
GabpaQ00422 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
GabpaQ00422 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.3□□□□□ -0.44
GabpaQ00422 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.3□□□□□ -0.44
GabpaQ00422 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GabpaQ00422 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
GabpaQ00422 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
GabpaQ00422 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.29□□□□□ -0.44
GabpaQ00422 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC12.29□□□□□ -0.44
GabpaQ00422 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
GabpaQ00422 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.29□□□□□ -0.44
GabpaQ00422 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
GabpaQ00422 Gm8019-201ENSMUST00000119317 587 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Gm5395-201ENSMUST00000121650 915 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.29□□□□□ -0.44
GabpaQ00422 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Gm5808-201ENSMUST00000178090 357 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.29□□□□□ -0.44
GabpaQ00422 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
GabpaQ00422 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Mir326-201ENSMUST00000083637 95 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC12.29□□□□□ -0.44
GabpaQ00422 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GabpaQ00422 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.29□□□□□ -0.44
GabpaQ00422 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.28□□□□□ -0.44
GabpaQ00422 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
GabpaQ00422 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.28□□□□□ -0.44
GabpaQ00422 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Gm12397-201ENSMUST00000117674 615 ntBASIC12.28□□□□□ -0.44
GabpaQ00422 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.28□□□□□ -0.44
GabpaQ00422 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Gm22876-201ENSMUST00000175450 298 ntBASIC12.28□□□□□ -0.44
GabpaQ00422 Gm5801-201ENSMUST00000182247 780 ntBASIC12.28□□□□□ -0.44
GabpaQ00422 Gm42779-201ENSMUST00000198807 406 ntBASIC12.28□□□□□ -0.44
GabpaQ00422 Gm7238-201ENSMUST00000206467 973 ntBASIC12.28□□□□□ -0.44
GabpaQ00422 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
GabpaQ00422 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Atf7-201ENSMUST00000096143 390 ntBASIC12.28□□□□□ -0.44
GabpaQ00422 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
GabpaQ00422 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.28□□□□□ -0.44
GabpaQ00422 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
GabpaQ00422 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
GabpaQ00422 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
GabpaQ00422 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
GabpaQ00422 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.27□□□□□ -0.44
GabpaQ00422 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms