Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm14231-201ENSMUST00000120090 592 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm8525-201ENSMUST00000189674 861 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm9409-201ENSMUST00000197017 316 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm8796-201ENSMUST00000219122 936 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm8615-201ENSMUST00000025307 771 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.61□□□□□ -0.23
Smarcc1P97496 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Smarcc1P97496 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc1P97496 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc1P97496 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc1P97496 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc1P97496 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc1P97496 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Smarcc1P97496 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC13.6□□□□□ -0.23
Smarcc1P97496 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC13.6□□□□□ -0.23
Smarcc1P97496 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc1P97496 Gm28032-201ENSMUST00000184104 96 ntBASIC13.6□□□□□ -0.23
Smarcc1P97496 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc1P97496 Gm37944-201ENSMUST00000194233 414 ntBASIC13.6□□□□□ -0.23
Smarcc1P97496 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 CT009713.2-201ENSMUST00000225532 1149 ntBASIC13.6□□□□□ -0.23
Smarcc1P97496 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcc1P97496 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcc1P97496 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc1P97496 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc1P97496 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcc1P97496 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Mir598-201ENSMUST00000102094 79 ntBASIC13.59□□□□□ -0.23
Smarcc1P97496 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc1P97496 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm13777-201ENSMUST00000118208 345 ntBASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm12463-201ENSMUST00000118271 849 ntBASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm5244-201ENSMUST00000164001 339 ntBASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm5190-201ENSMUST00000192434 357 ntBASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm42833-201ENSMUST00000196019 2124 ntBASIC13.59□□□□□ -0.23
Smarcc1P97496 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC13.59□□□□□ -0.23
Smarcc1P97496 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Gm3791-201ENSMUST00000220790 768 ntBASIC13.59□□□□□ -0.23
Smarcc1P97496 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcc1P97496 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms