Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rad50P70388 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rad50P70388 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Gm43937-201ENSMUST00000204640 3122 ntBASIC13.03□□□□□ -0.32
Rad50P70388 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC13.03□□□□□ -0.32
Rad50P70388 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.02□□□□□ -0.32
Rad50P70388 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rad50P70388 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Mir1893-201ENSMUST00000122565 83 ntBASIC13.02□□□□□ -0.33
Rad50P70388 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Gm7985-201ENSMUST00000183329 981 ntBASIC13.02□□□□□ -0.33
Rad50P70388 Gm19927-201ENSMUST00000185792 781 ntBASIC13.02□□□□□ -0.33
Rad50P70388 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Rad50P70388 Gm43912-201ENSMUST00000204352 538 ntBASIC13.02□□□□□ -0.33
Rad50P70388 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.02□□□□□ -0.33
Rad50P70388 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Gm2594-201ENSMUST00000214774 742 ntBASIC13.02□□□□□ -0.33
Rad50P70388 Gm6390-201ENSMUST00000215034 589 ntBASIC13.02□□□□□ -0.33
Rad50P70388 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.02□□□□□ -0.33
Rad50P70388 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.02□□□□□ -0.33
Rad50P70388 CT025679.1-201ENSMUST00000227106 449 ntBASIC13.02□□□□□ -0.33
Rad50P70388 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rad50P70388 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rad50P70388 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.02□□□□□ -0.33
Rad50P70388 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Gm43375-201ENSMUST00000196705 2480 ntBASIC13.02□□□□□ -0.33
Rad50P70388 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC13.02□□□□□ -0.33
Rad50P70388 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rad50P70388 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rad50P70388 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rad50P70388 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rad50P70388 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC13.01□□□□□ -0.33
Rad50P70388 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 AC129336.2-201ENSMUST00000218053 3086 ntBASIC13.01□□□□□ -0.33
Rad50P70388 Snord23-201ENSMUST00000116828 109 ntBASIC13.01□□□□□ -0.33
Rad50P70388 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.01□□□□□ -0.33
Rad50P70388 Gm11952-201ENSMUST00000121172 821 ntBASIC13.01□□□□□ -0.33
Rad50P70388 Gm25830-201ENSMUST00000158923 132 ntBASIC13.01□□□□□ -0.33
Rad50P70388 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC13.01□□□□□ -0.33
Rad50P70388 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.01□□□□□ -0.33
Rad50P70388 Gm37852-201ENSMUST00000193027 350 ntBASIC13.01□□□□□ -0.33
Rad50P70388 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
Rad50P70388 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Rad50P70388 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.01□□□□□ -0.33
Rad50P70388 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad50P70388 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms