Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pdx1P52946 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 Capsl-202ENSMUST00000226688 739 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 Gm7589-201ENSMUST00000085631 534 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.72□□□□□ -0.69
Pdx1P52946 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.72□□□□□ -0.69
Pdx1P52946 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.72□□□□□ -0.69
Pdx1P52946 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Pdx1P52946 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pdx1P52946 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdx1P52946 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pdx1P52946 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.72□□□□□ -0.69
Pdx1P52946 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Pdx1P52946 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdx1P52946 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdx1P52946 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.71□□□□□ -0.69
Pdx1P52946 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pdx1P52946 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pdx1P52946 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdx1P52946 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Pdx1P52946 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pdx1P52946 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pdx1P52946 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.71□□□□□ -0.69
Pdx1P52946 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdx1P52946 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.71□□□□□ -0.69
Pdx1P52946 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.71□□□□□ -0.69
Pdx1P52946 Gm5529-201ENSMUST00000165691 891 ntBASIC10.71□□□□□ -0.69
Pdx1P52946 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pdx1P52946 Mir7035-201ENSMUST00000184713 82 ntBASIC10.71□□□□□ -0.69
Pdx1P52946 Mir7032-201ENSMUST00000185154 79 ntBASIC10.71□□□□□ -0.69
Pdx1P52946 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.71□□□□□ -0.69
Pdx1P52946 Gm37365-201ENSMUST00000193109 409 ntBASIC10.71□□□□□ -0.69
Pdx1P52946 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.71□□□□□ -0.69
Pdx1P52946 Gm37028-201ENSMUST00000194276 107 ntBASIC10.71□□□□□ -0.69
Pdx1P52946 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.71□□□□□ -0.69
Pdx1P52946 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.71□□□□□ -0.69
Pdx1P52946 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdx1P52946 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.71□□□□□ -0.69
Pdx1P52946 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Pdx1P52946 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pdx1P52946 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pdx1P52946 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pdx1P52946 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Pdx1P52946 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdx1P52946 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdx1P52946 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdx1P52946 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.71□□□□□ -0.7
Pdx1P52946 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdx1P52946 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.71□□□□□ -0.7
Pdx1P52946 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdx1P52946 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdx1P52946 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pdx1P52946 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pdx1P52946 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdx1P52946 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdx1P52946 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 Gm22442-201ENSMUST00000157256 144 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Pdx1P52946 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pdx1P52946 Gm8492-201ENSMUST00000182375 987 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 Gm43097-201ENSMUST00000196867 151 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Pdx1P52946 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdx1P52946 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdx1P52946 Gm8162-201ENSMUST00000213951 665 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 Gm2594-201ENSMUST00000214774 742 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pdx1P52946 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pdx1P52946 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.7□□□□□ -0.7
Pdx1P52946 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pdx1P52946 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdx1P52946 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms