Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.05□□□□□ -0.64
SftpbP50405 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SftpbP50405 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.05□□□□□ -0.64
SftpbP50405 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.05□□□□□ -0.64
SftpbP50405 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.04□□□□□ -0.64
SftpbP50405 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SftpbP50405 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.04□□□□□ -0.64
SftpbP50405 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.04□□□□□ -0.64
SftpbP50405 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Gm15264-201ENSMUST00000118050 502 ntBASIC11.04□□□□□ -0.64
SftpbP50405 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.04□□□□□ -0.64
SftpbP50405 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.04□□□□□ -0.64
SftpbP50405 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.04□□□□□ -0.64
SftpbP50405 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SftpbP50405 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Gm5599-201ENSMUST00000209602 788 ntBASIC11.04□□□□□ -0.64
SftpbP50405 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
SftpbP50405 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.04□□□□□ -0.64
SftpbP50405 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.04□□□□□ -0.64
SftpbP50405 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SftpbP50405 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SftpbP50405 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.04□□□□□ -0.64
SftpbP50405 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.03□□□□□ -0.64
SftpbP50405 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.03□□□□□ -0.64
SftpbP50405 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SftpbP50405 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.03□□□□□ -0.64
SftpbP50405 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Gm9062-201ENSMUST00000117712 727 ntBASIC11.03□□□□□ -0.64
SftpbP50405 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.03□□□□□ -0.64
SftpbP50405 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.03□□□□□ -0.64
SftpbP50405 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.03□□□□□ -0.64
SftpbP50405 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.03□□□□□ -0.64
SftpbP50405 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.03□□□□□ -0.64
SftpbP50405 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.03□□□□□ -0.64
SftpbP50405 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.03□□□□□ -0.64
SftpbP50405 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SftpbP50405 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SftpbP50405 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SftpbP50405 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
SftpbP50405 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms