Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.16□□□□□ -0.62
Cxcl12P40224 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC11.16□□□□□ -0.62
Cxcl12P40224 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC11.16□□□□□ -0.62
Cxcl12P40224 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Gm5244-201ENSMUST00000164001 339 ntBASIC11.16□□□□□ -0.62
Cxcl12P40224 Gm22994-201ENSMUST00000175422 82 ntBASIC11.16□□□□□ -0.62
Cxcl12P40224 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC11.16□□□□□ -0.62
Cxcl12P40224 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.16□□□□□ -0.62
Cxcl12P40224 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC11.16□□□□□ -0.62
Cxcl12P40224 AC156274.1-201ENSMUST00000219193 634 ntBASIC11.16□□□□□ -0.62
Cxcl12P40224 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC11.16□□□□□ -0.62
Cxcl12P40224 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.16□□□□□ -0.62
Cxcl12P40224 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cxcl12P40224 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
Cxcl12P40224 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm7790-201ENSMUST00000118716 1310 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.15□□□□□ -0.62
Cxcl12P40224 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cxcl12P40224 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm15720-201ENSMUST00000117133 282 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm8754-201ENSMUST00000118391 520 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC11.15□□□□□ -0.62
Cxcl12P40224 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC11.15□□□□□ -0.62
Cxcl12P40224 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC11.15□□□□□ -0.62
Cxcl12P40224 H2afy3-201ENSMUST00000151919 1112 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm26021-201ENSMUST00000158664 131 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm25694-201ENSMUST00000175448 282 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm22876-201ENSMUST00000175450 298 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm28032-201ENSMUST00000184104 96 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Ighv5-1-201ENSMUST00000193324 353 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm9523-201ENSMUST00000199146 1159 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm7812-201ENSMUST00000203479 874 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 AC124772.3-201ENSMUST00000222535 575 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 CT025642.1-201ENSMUST00000224734 1219 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm17541-201ENSMUST00000080062 525 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 AC154640.1-203ENSMUST00000228316 1618 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm13120-201ENSMUST00000117343 1446 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gm6783-201ENSMUST00000120916 1437 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.15□□□□□ -0.62
Cxcl12P40224 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl12P40224 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms