Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.49□□□□□ -0.89
Upk2P38575 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.49□□□□□ -0.89
Upk2P38575 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.49□□□□□ -0.89
Upk2P38575 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Upk2P38575 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.49□□□□□ -0.89
Upk2P38575 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.49□□□□□ -0.89
Upk2P38575 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.49□□□□□ -0.89
Upk2P38575 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Upk2P38575 Gm11380-201ENSMUST00000118067 560 ntBASIC9.49□□□□□ -0.89
Upk2P38575 Gm12337-201ENSMUST00000119634 400 ntBASIC9.49□□□□□ -0.89
Upk2P38575 Gm10169-201ENSMUST00000121822 348 ntBASIC9.49□□□□□ -0.89
Upk2P38575 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC9.49□□□□□ -0.89
Upk2P38575 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC9.49□□□□□ -0.89
Upk2P38575 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gm43097-201ENSMUST00000196867 151 ntBASIC9.49□□□□□ -0.89
Upk2P38575 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.49□□□□□ -0.89
Upk2P38575 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Upk2P38575 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.49□□□□□ -0.89
Upk2P38575 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.49□□□□□ -0.89
Upk2P38575 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Upk2P38575 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Upk2P38575 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Upk2P38575 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Upk2P38575 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Upk2P38575 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.48□□□□□ -0.89
Upk2P38575 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Upk2P38575 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Upk2P38575 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Upk2P38575 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC9.48□□□□□ -0.89
Upk2P38575 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.48□□□□□ -0.89
Upk2P38575 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.48□□□□□ -0.89
Upk2P38575 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Gm9673-201ENSMUST00000119287 781 ntBASIC9.48□□□□□ -0.89
Upk2P38575 Gm12791-201ENSMUST00000120788 655 ntBASIC9.48□□□□□ -0.89
Upk2P38575 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.48□□□□□ -0.89
Upk2P38575 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC9.48□□□□□ -0.89
Upk2P38575 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Upk2P38575 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.48□□□□□ -0.89
Upk2P38575 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.48□□□□□ -0.89
Upk2P38575 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.48□□□□□ -0.89
Upk2P38575 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.48□□□□□ -0.89
Upk2P38575 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Upk2P38575 Gm45594-201ENSMUST00000211717 241 ntBASIC9.48□□□□□ -0.89
Upk2P38575 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.48□□□□□ -0.89
Upk2P38575 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Mirlet7i-201ENSMUST00000083472 85 ntBASIC9.48□□□□□ -0.89
Upk2P38575 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Upk2P38575 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.48□□□□□ -0.89
Upk2P38575 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Upk2P38575 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Upk2P38575 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Upk2P38575 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Upk2P38575 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Upk2P38575 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Upk2P38575 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Upk2P38575 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms