Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Nedd8P29595 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nedd8P29595 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Nedd8P29595 Tigd4-201ENSMUST00000062623 3459 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Nedd8P29595 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Gtpbp8-204ENSMUST00000162512 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Irf9-203ENSMUST00000134863 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Nedd8P29595 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nedd8P29595 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nedd8P29595 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC9.89□□□□□ -0.83
Nedd8P29595 Adra1a-203ENSMUST00000159365 4118 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.88□□□□□ -0.83
Nedd8P29595 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC9.88□□□□□ -0.83
Nedd8P29595 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.88□□□□□ -0.83
Nedd8P29595 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm22133-201ENSMUST00000102082 109 ntBASIC9.88□□□□□ -0.83
Nedd8P29595 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm12247-201ENSMUST00000117585 670 ntBASIC9.88□□□□□ -0.83
Nedd8P29595 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm8459-201ENSMUST00000162504 760 ntBASIC9.88□□□□□ -0.83
Nedd8P29595 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm8343-201ENSMUST00000182705 994 ntBASIC9.88□□□□□ -0.83
Nedd8P29595 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.88□□□□□ -0.83
Nedd8P29595 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Inpp4a-207ENSMUST00000136846 3576 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.88□□□□□ -0.83
Nedd8P29595 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.88□□□□□ -0.83
Nedd8P29595 Gm37048-201ENSMUST00000194827 5578 ntBASIC9.88□□□□□ -0.83
Nedd8P29595 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nedd8P29595 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nedd8P29595 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.87□□□□□ -0.83
Nedd8P29595 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Nedd8P29595 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Itga7-201ENSMUST00000099112 4013 ntAPPRIS P2 TSL 2 BASIC9.87□□□□□ -0.83
Nedd8P29595 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Nedd8P29595 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.87□□□□□ -0.83
Nedd8P29595 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Gm7255-201ENSMUST00000187371 908 ntBASIC9.87□□□□□ -0.83
Nedd8P29595 Gm29543-201ENSMUST00000188138 967 ntBASIC9.87□□□□□ -0.83
Nedd8P29595 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.87□□□□□ -0.83
Nedd8P29595 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Gm19091-201ENSMUST00000208120 978 ntBASIC9.87□□□□□ -0.83
Nedd8P29595 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.87□□□□□ -0.83
Nedd8P29595 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.87□□□□□ -0.83
Nedd8P29595 Gm9111-201ENSMUST00000219394 709 ntBASIC9.87□□□□□ -0.83
Nedd8P29595 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nedd8P29595 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.87□□□□□ -0.83
Nedd8P29595 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.87□□□□□ -0.83
Nedd8P29595 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms