Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Vcam1P29533 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.43□□□□□ -0.42
Vcam1P29533 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm23439-201ENSMUST00000104292 132 ntBASIC12.43□□□□□ -0.42
Vcam1P29533 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.43□□□□□ -0.42
Vcam1P29533 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm43752-201ENSMUST00000198475 697 ntBASIC12.43□□□□□ -0.42
Vcam1P29533 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.43□□□□□ -0.42
Vcam1P29533 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm21142-201ENSMUST00000179999 2604 ntBASIC12.43□□□□□ -0.42
Vcam1P29533 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.43□□□□□ -0.42
Vcam1P29533 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vcam1P29533 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Vcam1P29533 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.43□□□□□ -0.42
Vcam1P29533 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.43□□□□□ -0.42
Vcam1P29533 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.42□□□□□ -0.42
Vcam1P29533 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.42□□□□□ -0.42
Vcam1P29533 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Vcam1P29533 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.42□□□□□ -0.42
Vcam1P29533 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vcam1P29533 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.42□□□□□ -0.42
Vcam1P29533 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Snora68-201ENSMUST00000104375 131 ntBASIC12.42□□□□□ -0.42
Vcam1P29533 Gm11235-201ENSMUST00000117763 333 ntBASIC12.42□□□□□ -0.42
Vcam1P29533 Gm14148-201ENSMUST00000122433 1008 ntBASIC12.42□□□□□ -0.42
Vcam1P29533 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.42□□□□□ -0.42
Vcam1P29533 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC12.42□□□□□ -0.42
Vcam1P29533 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 AC107711.4-201ENSMUST00000228948 440 ntBASIC12.42□□□□□ -0.42
Vcam1P29533 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.42□□□□□ -0.42
Vcam1P29533 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.42□□□□□ -0.42
Vcam1P29533 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.42□□□□□ -0.42
Vcam1P29533 Gm38034-201ENSMUST00000193915 2069 ntBASIC12.42□□□□□ -0.42
Vcam1P29533 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vcam1P29533 Gm38111-201ENSMUST00000194817 2741 ntBASIC12.42□□□□□ -0.42
Vcam1P29533 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.42□□□□□ -0.42
Vcam1P29533 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vcam1P29533 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Vcam1P29533 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Vcam1P29533 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm13171-201ENSMUST00000117233 391 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 Gm13120-201ENSMUST00000117343 1446 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 Gm12337-201ENSMUST00000119634 400 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.41□□□□□ -0.42
Vcam1P29533 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Vcam1P29533 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vcam1P29533 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vcam1P29533 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.41□□□□□ -0.42
Vcam1P29533 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC12.41□□□□□ -0.42
Vcam1P29533 Gm37301-201ENSMUST00000195412 568 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms