Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm6758-201ENSMUST00000119643 1055 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Gm11354-201ENSMUST00000121974 422 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Col8a2P25318 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Col8a2P25318 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm25951-201ENSMUST00000175330 64 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Gm26119-201ENSMUST00000175601 104 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Gm7593-201ENSMUST00000187246 644 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Gm43097-201ENSMUST00000196867 151 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm5302-201ENSMUST00000202130 796 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC9.04□□□□□ -0.96
Col8a2P25318 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm45500-201ENSMUST00000211676 803 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.04□□□□□ -0.96
Col8a2P25318 AC158986.2-201ENSMUST00000227487 618 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Col8a2P25318 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm37058-201ENSMUST00000193393 1644 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Col8a2P25318 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Col8a2P25318 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC9.03□□□□□ -0.96
Col8a2P25318 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Gm4993-201ENSMUST00000118719 1174 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Gm12950-201ENSMUST00000121683 417 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Gm22344-201ENSMUST00000122642 278 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC9.03□□□□□ -0.96
Col8a2P25318 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Gm28032-201ENSMUST00000184104 96 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Ighv5-8-202ENSMUST00000191967 337 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Gm42833-201ENSMUST00000196019 2124 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Col8a2P25318 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Col8a2P25318 Gm6794-201ENSMUST00000203829 457 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Gm7589-201ENSMUST00000085631 534 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.03□□□□□ -0.96
Col8a2P25318 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Col8a2P25318 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col8a2P25318 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms