Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.41□□□□□ -0.9
UbbP0CG49 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.41□□□□□ -0.9
UbbP0CG49 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.41□□□□□ -0.9
UbbP0CG49 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm14058-201ENSMUST00000116082 735 ntBASIC9.41□□□□□ -0.9
UbbP0CG49 Gm15615-201ENSMUST00000118876 198 ntBASIC9.41□□□□□ -0.9
UbbP0CG49 Gm25492-201ENSMUST00000157383 129 ntBASIC9.41□□□□□ -0.9
UbbP0CG49 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm37981-201ENSMUST00000194280 535 ntBASIC9.41□□□□□ -0.9
UbbP0CG49 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.41□□□□□ -0.9
UbbP0CG49 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.41□□□□□ -0.9
UbbP0CG49 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.41□□□□□ -0.9
UbbP0CG49 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm31941-201ENSMUST00000209689 350 ntBASIC9.41□□□□□ -0.9
UbbP0CG49 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gm18042-201ENSMUST00000219887 790 ntBASIC9.41□□□□□ -0.9
UbbP0CG49 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.41□□□□□ -0.9
UbbP0CG49 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
UbbP0CG49 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
UbbP0CG49 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
UbbP0CG49 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
UbbP0CG49 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
UbbP0CG49 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UbbP0CG49 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
UbbP0CG49 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
UbbP0CG49 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.4□□□□□ -0.9
UbbP0CG49 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
UbbP0CG49 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Gm11450-201ENSMUST00000121144 333 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Gm26083-201ENSMUST00000157904 193 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 Gm4812-201ENSMUST00000182847 993 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.4□□□□□ -0.9
UbbP0CG49 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
UbbP0CG49 Gm43916-201ENSMUST00000205062 967 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.4□□□□□ -0.9
UbbP0CG49 Gm9899-201ENSMUST00000065519 555 ntBASIC9.4□□□□□ -0.9
UbbP0CG49 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
UbbP0CG49 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
UbbP0CG49 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UbbP0CG49 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.4□□□□□ -0.91
UbbP0CG49 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
UbbP0CG49 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
UbbP0CG49 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms