Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Gm4978-201ENSMUST00000071565 801 ntBASIC9.5□□□□□ -0.89
P04224 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 CT572985.1-201ENSMUST00000220599 4714 ntBASIC9.5□□□□□ -0.89
P04224 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC9.5□□□□□ -0.89
P04224 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
P04224 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
P04224 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.5□□□□□ -0.89
P04224 Gm18222-201ENSMUST00000202416 1387 ntBASIC9.5□□□□□ -0.89
P04224 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.5□□□□□ -0.89
P04224 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.49□□□□□ -0.89
P04224 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.49□□□□□ -0.89
P04224 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.49□□□□□ -0.89
P04224 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.49□□□□□ -0.89
P04224 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
P04224 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.49□□□□□ -0.89
P04224 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.49□□□□□ -0.89
P04224 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.49□□□□□ -0.89
P04224 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.49□□□□□ -0.89
P04224 Gm11663-201ENSMUST00000117888 290 ntBASIC9.49□□□□□ -0.89
P04224 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Mir1896-201ENSMUST00000122641 81 ntBASIC9.49□□□□□ -0.89
P04224 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC9.49□□□□□ -0.89
P04224 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.49□□□□□ -0.89
P04224 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.49□□□□□ -0.89
P04224 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm20495-201ENSMUST00000173902 235 ntBASIC9.49□□□□□ -0.89
P04224 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.49□□□□□ -0.89
P04224 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm9353-201ENSMUST00000200472 604 ntBASIC9.49□□□□□ -0.89
P04224 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.49□□□□□ -0.89
P04224 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.49□□□□□ -0.89
P04224 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm37962-201ENSMUST00000195535 2034 ntBASIC9.49□□□□□ -0.89
P04224 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC9.49□□□□□ -0.89
P04224 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Atg7-201ENSMUST00000032457 3761 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Olfr804-202ENSMUST00000213331 5737 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
P04224 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
P04224 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm10531-201ENSMUST00000193527 2303 ntBASIC9.49□□□□□ -0.89
P04224 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
P04224 Gm42460-201ENSMUST00000198863 2567 ntBASIC9.49□□□□□ -0.89
P04224 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P04224 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
P04224 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC9.48□□□□□ -0.89
P04224 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
P04224 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
P04224 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
P04224 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.48□□□□□ -0.89
P04224 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms