Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igh-VJ558P01758 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm12616-201ENSMUST00000118594 382 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Mir1956-201ENSMUST00000157748 65 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm15744-201ENSMUST00000161734 213 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm12624-201ENSMUST00000177615 382 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm12621-201ENSMUST00000177760 382 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm12615-201ENSMUST00000177970 382 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm12622-201ENSMUST00000177975 382 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm12627-201ENSMUST00000178412 382 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm12625-201ENSMUST00000179122 382 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm12614-201ENSMUST00000179586 382 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm12613-201ENSMUST00000180323 382 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm9884-201ENSMUST00000194343 1222 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm44126-201ENSMUST00000204831 514 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm8170-201ENSMUST00000218581 945 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 AC153524.2-202ENSMUST00000220401 1794 ntBASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Igh-VJ558P01758 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Igh-VJ558P01758 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
Igh-VJ558P01758 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm25562-201ENSMUST00000104608 133 ntBASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm16030-201ENSMUST00000159098 603 ntBASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm5529-201ENSMUST00000165691 891 ntBASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm20392-201ENSMUST00000173047 701 ntBASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm18014-201ENSMUST00000183369 817 ntBASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm42710-201ENSMUST00000200608 985 ntBASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Igh-VJ558P01758 Mirlet7i-201ENSMUST00000083472 85 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms