Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Mir6934-201ENSMUST00000183965 62 ntBASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Gm45728-201ENSMUST00000211475 2979 ntBASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Gm45893-201ENSMUST00000211899 247 ntBASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 CT010486.3-201ENSMUST00000224555 811 ntBASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc180J3QNE4 Gm40332-201ENSMUST00000199847 938 ntBASIC19.52■□□□□ 0.71
Ccdc180J3QNE4 Gm6008-201ENSMUST00000206542 874 ntBASIC19.52■□□□□ 0.71
Ccdc180J3QNE4 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc180J3QNE4 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Ccdc180J3QNE4 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc180J3QNE4 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Ccdc180J3QNE4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc180J3QNE4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Fam220-ps-201ENSMUST00000116535 783 ntBASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Gm8216-201ENSMUST00000117232 601 ntBASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Gm11929-201ENSMUST00000118175 945 ntBASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Gm8625-201ENSMUST00000194185 1077 ntBASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Gm8083-201ENSMUST00000203976 475 ntBASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 AC107711.3-201ENSMUST00000228939 1035 ntBASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc180J3QNE4 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Gm11771-201ENSMUST00000118124 732 ntBASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Gm21963-201ENSMUST00000179519 330 ntBASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 AC116596.1-201ENSMUST00000228112 1762 ntBASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ccdc180J3QNE4 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 BB187690-201ENSMUST00000198619 1176 ntBASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 AC242269.1-201ENSMUST00000227020 741 ntBASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Mypopos-202ENSMUST00000205975 2321 ntBASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms