Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm7190-201ENSMUST00000118669 1452 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 AC158777.1-201ENSMUST00000226216 1724 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm13456-201ENSMUST00000118928 1365 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm13197-201ENSMUST00000117204 225 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm8754-201ENSMUST00000118391 520 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm14153-201ENSMUST00000119923 1139 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm6773-201ENSMUST00000182377 878 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Mir6360-201ENSMUST00000184278 126 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm37390-201ENSMUST00000192452 872 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Spin3-ps-201ENSMUST00000192825 770 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm6069-201ENSMUST00000196501 463 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 AC129017.2-201ENSMUST00000226118 1284 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm4883-201ENSMUST00000085702 528 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Gm44443-201ENSMUST00000204396 5633 ntBASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Gm6967-201ENSMUST00000182599 1007 ntBASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Gm18621-201ENSMUST00000222677 679 ntBASIC10.94□□□□□ -0.66
Col4a6B1AVK5 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC10.94□□□□□ -0.66
Col4a6B1AVK5 AC123698.1-201ENSMUST00000227090 402 ntBASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col4a6B1AVK5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm25561-201ENSMUST00000104607 125 ntBASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 n-R5s154-201ENSMUST00000122513 108 ntBASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm22616-201ENSMUST00000179783 100 ntBASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Mir6981-201ENSMUST00000184293 115 ntBASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm42780-201ENSMUST00000197083 734 ntBASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm44716-201ENSMUST00000209007 710 ntBASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC10.93□□□□□ -0.66
Col4a6B1AVK5 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms