Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm27390-201ENSMUST00000184516 176 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm7924-201ENSMUST00000203975 785 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 AC124686.1-201ENSMUST00000225546 522 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm43340-201ENSMUST00000200448 1344 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm11401-201ENSMUST00000117212 344 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm42915-201ENSMUST00000197478 323 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm5302-201ENSMUST00000202130 796 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Cyp2c44-201ENSMUST00000026211 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm6286-201ENSMUST00000145247 762 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm42764-201ENSMUST00000197835 741 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm18901-201ENSMUST00000197840 1444 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm4880-201ENSMUST00000207645 1696 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm5459-201ENSMUST00000171235 798 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm25145-201ENSMUST00000177640 110 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Trav4-1-201ENSMUST00000199078 330 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm13197-201ENSMUST00000117204 225 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm12004-201ENSMUST00000117869 718 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm28916-201ENSMUST00000186988 699 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Gm5696-201ENSMUST00000189850 552 ntBASIC10.68□□□□□ -0.7
Cdh23Q99PF4 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Srsf5-203ENSMUST00000110352 1491 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Srsf5-204ENSMUST00000110354 1489 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh23Q99PF4 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 AC122858.2-201ENSMUST00000228571 1362 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Cd1d2-203ENSMUST00000194208 1527 ntAPPRIS P5 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Gm5270-201ENSMUST00000121506 1002 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 1700019E08Rik-201ENSMUST00000134308 424 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Gm27483-201ENSMUST00000184983 71 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Gm5960-201ENSMUST00000188483 406 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 Gm6439-201ENSMUST00000199849 862 ntBASIC10.67□□□□□ -0.7
Cdh23Q99PF4 4930500F04Rik-203ENSMUST00000202177 576 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms