Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm37597-201ENSMUST00000191853 382 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm38233-201ENSMUST00000194259 807 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm5302-201ENSMUST00000202130 796 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm5311-201ENSMUST00000203518 709 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm29689-201ENSMUST00000221076 589 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 AC106830.1-201ENSMUST00000228032 1003 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm4778-201ENSMUST00000098878 1098 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm8725-201ENSMUST00000221829 1333 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.54□□□□□ -0.56
Clp1Q99LI9 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm12439-201ENSMUST00000117162 365 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm11473-201ENSMUST00000118980 359 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm14231-201ENSMUST00000120090 592 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm14699-201ENSMUST00000122340 228 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm5244-201ENSMUST00000164001 339 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm38170-201ENSMUST00000195404 816 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm8920-201ENSMUST00000196153 924 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm42687-201ENSMUST00000199075 164 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm43106-201ENSMUST00000199485 637 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm18256-201ENSMUST00000209087 907 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.53□□□□□ -0.56
Clp1Q99LI9 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms