Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gm7255-201ENSMUST00000187371 908 ntBASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gm8828-201ENSMUST00000196786 1290 ntBASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gm5302-201ENSMUST00000202130 796 ntBASIC13.42□□□□□ -0.26
RtcbQ99LF4 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
RtcbQ99LF4 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gm45663-201ENSMUST00000210429 1632 ntBASIC13.42□□□□□ -0.26
RtcbQ99LF4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Gm4865-201ENSMUST00000196284 1309 ntBASIC13.41□□□□□ -0.26
RtcbQ99LF4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.41□□□□□ -0.26
RtcbQ99LF4 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Gm12684-201ENSMUST00000118675 999 ntBASIC13.41□□□□□ -0.26
RtcbQ99LF4 Gm6517-201ENSMUST00000121056 511 ntBASIC13.41□□□□□ -0.26
RtcbQ99LF4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC13.41□□□□□ -0.26
RtcbQ99LF4 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.41□□□□□ -0.26
RtcbQ99LF4 Gm44388-201ENSMUST00000204350 258 ntBASIC13.41□□□□□ -0.26
RtcbQ99LF4 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Gm8557-201ENSMUST00000220777 475 ntBASIC13.41□□□□□ -0.26
RtcbQ99LF4 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.41□□□□□ -0.26
RtcbQ99LF4 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RtcbQ99LF4 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RtcbQ99LF4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm38034-201ENSMUST00000193915 2069 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm14716-201ENSMUST00000120138 718 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Defa-ps17-201ENSMUST00000121849 171 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Mir3091-201ENSMUST00000175086 76 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm5801-201ENSMUST00000182247 780 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Mir7088-201ENSMUST00000184227 86 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm43371-201ENSMUST00000202838 1031 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm44236-201ENSMUST00000204492 513 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Mir194-2-201ENSMUST00000083648 86 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Gm13169-201ENSMUST00000122090 1459 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.4□□□□□ -0.26
RtcbQ99LF4 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RtcbQ99LF4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
RtcbQ99LF4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.4□□□□□ -0.27
RtcbQ99LF4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm15599-201ENSMUST00000122283 1345 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms