Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Usp11Q99K46 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Usp11Q99K46 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 AA474408-201ENSMUST00000098110 3339 ntBASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm13888-201ENSMUST00000119148 422 ntBASIC11.45□□□□□ -0.58
Usp11Q99K46 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm24992-201ENSMUST00000157412 130 ntBASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm22138-201ENSMUST00000158748 128 ntBASIC11.45□□□□□ -0.58
Usp11Q99K46 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.45□□□□□ -0.58
Usp11Q99K46 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm2875-201ENSMUST00000211333 360 ntBASIC11.45□□□□□ -0.58
Usp11Q99K46 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Usp11Q99K46 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.45□□□□□ -0.58
Usp11Q99K46 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.45□□□□□ -0.58
Usp11Q99K46 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.45□□□□□ -0.58
Usp11Q99K46 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Usp11Q99K46 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Usp11Q99K46 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Usp11Q99K46 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Usp11Q99K46 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.45□□□□□ -0.58
Usp11Q99K46 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Usp11Q99K46 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Usp11Q99K46 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Usp11Q99K46 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Usp11Q99K46 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.44□□□□□ -0.58
Usp11Q99K46 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Usp11Q99K46 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.44□□□□□ -0.58
Usp11Q99K46 Gm11451-201ENSMUST00000118946 630 ntBASIC11.44□□□□□ -0.58
Usp11Q99K46 Gm1848-201ENSMUST00000120711 789 ntBASIC11.44□□□□□ -0.58
Usp11Q99K46 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.44□□□□□ -0.58
Usp11Q99K46 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.44□□□□□ -0.58
Usp11Q99K46 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Usp11Q99K46 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.44□□□□□ -0.58
Usp11Q99K46 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Usp11Q99K46 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp11Q99K46 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.44□□□□□ -0.58
Usp11Q99K46 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.43□□□□□ -0.58
Usp11Q99K46 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Gm19246-201ENSMUST00000173599 255 ntBASIC11.43□□□□□ -0.58
Usp11Q99K46 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp11Q99K46 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.43□□□□□ -0.58
Usp11Q99K46 Gm44329-201ENSMUST00000197469 112 ntBASIC11.43□□□□□ -0.58
Usp11Q99K46 Gm43058-201ENSMUST00000197645 625 ntBASIC11.43□□□□□ -0.58
Usp11Q99K46 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms