Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Gm23745-201ENSMUST00000104230 125 ntBASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Gm14113-201ENSMUST00000121399 976 ntBASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Gm3828-201ENSMUST00000121817 257 ntBASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc17Q8CE13 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm15617-201ENSMUST00000118973 771 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm20781-201ENSMUST00000193154 693 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm21736-201ENSMUST00000195399 693 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm18010-201ENSMUST00000203553 202 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm9204-201ENSMUST00000212641 947 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm5178-201ENSMUST00000219380 898 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc17Q8CE13 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms